STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IFITM5Interferon induced transmembrane protein 5. (133 aa)    
Predicted Functional Partners:
IFITM10
Uncharacterized protein.
      
0.817
TMEM38B
Trimeric intracellular cation channel type B.
      
 0.630
CRTAP
Cartilage-associated protein.
      
 0.605
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
    
 
 0.579
LAMP1
Uncharacterized protein.
    
 
 0.534
FKBP10
Peptidylprolyl isomerase.
    
 
 0.516
P3H1
Prolyl 3-hydroxylase 1 isoform 1.
      
 0.515
ALPL
Alkaline phosphatase.
      
 0.514
RIC8A
RIC8 guanine nucleotide exchange factor A.
      
 0.509
PGGHG
Protein-glucosylgalactosylhydroxylysine glucosidase.
   
  
 0.507
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.