STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPSCR1ASPSCR1 tether for SLC2A4, UBX domain containing. (555 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein.
    
 
 0.979
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.966
UBXN2A
UBX domain protein 2A.
    
 
 0.966
NSFL1C
NSFL1 cofactor.
    
 
 0.965
UBXN2B
UBX domain protein 2B.
    
 
 0.965
UBXN6
UBX domain protein 6.
   
 
0.965
UBXN10
UBX domain-containing protein 10 isoform X1.
    
 
 0.963
VCP
Transitional endoplasmic reticulum ATPase; Necessary for the fragmentation of Golgi stacks during mitosis and for their reassembly after mitosis. Involved in the formation of the transitional endoplasmic reticulum (tER). The transfer of membranes from the endoplasmic reticulum to the Golgi apparatus occurs via 50-70 nm transition vesicles which derive from part-rough, part-smooth transitional elements of the endoplasmic reticulum (tER). Vesicle budding from the tER is an ATP-dependent process. The ternary complex containing UFD1, VCP and NPLOC4 binds ubiquitinated proteins and is neces [...]
    
 
 0.962
FAF1
Fas associated factor 1.
    
 
 0.960
PRCC
Proline rich mitotic checkpoint control factor.
      
 0.811
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.