STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC82Coiled-coil domain containing 82. (518 aa)    
Predicted Functional Partners:
GPALPP1
GPALPP motifs-containing protein 1 isoform a.
      
 0.869
LRRC2
Leucine-rich repeat-containing protein 2 isoform X1.
      
 0.869
KRT34
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.730
KRT31
IF rod domain-containing protein; Belongs to the intermediate filament family.
      
 0.689
SLC26A7
Anion exchange transporter.
      
 0.611
KCNIP3
Potassium voltage-gated channel interacting protein 3.
      
 0.611
CACNA2D3
Calcium voltage-gated channel auxiliary subunit alpha2delta 3.
      
 0.611
C11orf54
Chromosome 11 open reading frame 54.
      
 0.571
TBC1D22B
TBC1 domain family member 22B.
      
 0.557
PDE4D
Phosphodiesterase.
   
  
 0.556
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.