STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CASKIN2CASK interacting protein 2. (1197 aa)    
Predicted Functional Partners:
FBXO24
F-box protein 24.
    
 
 0.730
MRPL12
Mitochondrial ribosomal protein L12.
    
 
 0.724
RPL17-C18orf32
60S ribosomal protein L17 isoform a; Belongs to the universal ribosomal protein uL22 family.
    
 
 0.698
NUB1
Negative regulator of ubiquitin like proteins 1.
    
 
 0.673
HMGN2
Non-histone chromosomal protein HMG-17.
    
 
 0.622
PDRG1
P53 and DNA damage regulated 1.
    
 
 0.617
GPR101
Putative G-protein coupled receptor 101; Belongs to the G-protein coupled receptor 1 family.
      
 0.609
EIF2B2
Eukaryotic translation initiation factor 2B subunit beta; Belongs to the eIF-2B alpha/beta/delta subunits family.
   
 
 0.586
I3LLG5_PIG
Uncharacterized protein.
   
 
 0.553
SSR4
Signal sequence receptor subunit 4.
      
 0.547
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.