STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ODF4Uncharacterized protein. (314 aa)    
Predicted Functional Partners:
CABYR
RIIa domain-containing protein.
      
 0.828
ODF3
Outer dense fiber of sperm tails 3.
      
 0.795
CBY2
Spermatid associated.
      
 0.761
DKKL1
Dickkopf-like protein 1 isoform X2.
      
 0.734
SLC26A8
Solute carrier family 26 member 8.
      
 0.694
OAZ3
Ornithine decarboxylase antizyme 3.
      
 0.692
TSSK6
Testis-specific serine/threonine-protein kinase 6; Belongs to the protein kinase superfamily.
      
 0.691
ROPN1
Ropporin-1B isoform X1.
      
 0.680
LRRC6
Leucine rich repeat containing 6.
      
 0.676
ODF1
Outer dense fiber protein 1; Component of the outer dense fibers (ODF) of spermatozoa. ODF are filamentous structures located on the outside of the axoneme in the midpiece and principal piece of the mammalian sperm tail and may help to maintain the passive elastic structures and elastic recoil of the sperm tail.
   
  
 0.666
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.