STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO1BMyosin IB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1136 aa)    
Predicted Functional Partners:
GSE1
Gse1 coiled-coil protein.
      
 0.536
CDKL3
Cyclin dependent kinase like 3.
   
  
 0.534
ASPH
Aspartate beta-hydroxylase.
   
  
 0.521
CNPY2
Saposin B-type domain-containing protein.
      
 0.514
ASPN
Asporin.
   
  
 0.497
CCDC34
Coiled-coil domain containing 34.
      
 0.493
ADCK1
AarF domain containing kinase 1.
      
 0.488
PLEKHH3
Pleckstrin homology, MyTH4 and FERM domain containing H3.
 
  
 
 0.487
COG3
Component of oligomeric golgi complex 3; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.487
ODAM
Odontogenic ameloblast-associated protein; Tooth-associated epithelia protein that probably plays a role in odontogenesis, the complex process that results in the initiation and generation of the tooth. May be incorporated in the enamel matrix at the end of mineralization process. Involved in the induction of RHOA activity via interaction with ARHGEF and expression of downstream factors such as ROCK. Plays a role in attachment of the junctional epithelium to the tooth surface; Belongs to the ODAM family.
      
 0.480
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.