STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SWSAP1SWIM-type zinc finger 7 associated protein 1. (250 aa)    
Predicted Functional Partners:
ZSWIM7
Zinc finger SWIM domain-containing protein 7.
    
 0.859
FIGNL1
Fidgetin-like protein 1 isoform 1; Belongs to the AAA ATPase family.
    
 
 0.762
MEIOB
Meiosis specific with OB-fold.
      
 0.731
SPIDR
DNA repair-scaffolding protein isoform 1.
    
 
 0.722
A0A287B8J8_PIG
Uncharacterized protein.
     
 0.677
PDS5B
PDS5 cohesin associated factor B.
      
 0.636
MSH4
MutS homolog 4.
      
 0.617
MSH2
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
     
 0.607
MSH6
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
     
 0.607
XRCC3
DNA repair protein; Involved in the homologous recombination repair (HRR) pathway of double-stranded DNA, thought to repair chromosomal fragmentation, translocations and deletions; Belongs to the RecA family. RAD51 subfamily.
    
 
 0.597
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.