STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC18Coiled-coil domain containing 18. (1457 aa)    
Predicted Functional Partners:
ABCD3
ATP binding cassette subfamily D member 3.
      
 0.726
CCDC14
Coiled-coil domain-containing protein 14 isoform X1.
   
 
 0.622
KLHDC8A
Kelch domain-containing protein 8A.
      
 0.592
TMEM71
Transmembrane protein 71.
      
 0.572
PRADC1
Protease associated domain containing 1.
      
 0.571
PRSS37
Putative inactive serine protease 37.
      
 0.548
RAB42
Ras-related protein Rab-42 isoform 1.
    
 
 0.517
SFXN4
Sideroflexin 4.
      
 0.516
SLC44A5
Solute carrier family 44 member 5; Belongs to the CTL (choline transporter-like) family.
      
 0.513
TULP2
TUB like protein 2; Belongs to the TUB family.
      
 0.504
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.