STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPRIN1Cell cycle associated protein 1. (709 aa)    
Predicted Functional Partners:
G3BP1
G3BP stress granule assembly factor 1.
   
 
 0.989
G3BP2
Ras GTPase-activating protein-binding protein 2 isoform X1.
   
 
 0.975
USP10
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.884
UBAP2L
Ubiquitin associated protein 2 like.
   
 
 0.791
FXR1
Fragile X mental retardation syndrome-related protein 1 isoform X1.
   
 
 0.754
LSM14A
Uncharacterized protein.
   
 
 0.714
EIF4E
Eukaryotic translation initiation factor 4E; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.705
CSDE1
Cold shock domain containing E1.
   
 
 0.700
TIA1
TIA1 cytotoxic granule associated RNA binding protein.
   
 
 0.686
NUFIP2
Nuclear FMR1 interacting protein 2.
    
 
 0.675
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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