STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CPQPeptidase_M28 domain-containing protein. (512 aa)    
Predicted Functional Partners:
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
     
 0.902
MTFR1
Mitochondrial fission regulator 1 isoform 1.
      
 0.878
ADAMTSL2
ADAMTS like 2.
      
 0.762
TEC
Tyrosine-protein kinase.
    
 
 0.758
GGA2
Golgi associated, gamma adaptin ear containing, ARF binding protein 2.
      
 0.661
KCNH1
Uncharacterized protein.
      
 0.587
CPOX
Uncharacterized protein.
      
 0.585
EPHA8
EPH receptor A8.
    
 
 0.580
AGBL2
ATP/GTP binding protein like 2.
      
 0.579
LTBP1
Latent transforming growth factor beta binding protein 1.
   
 
 0.554
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.