MYT1L protein (Sus scrofa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MYT1L

Myelin transcription factor 1 like. (1193 aa)

Predicted Functional Partners:

NEUROD1

0.717

LHX3

0.620

NEUROD2

0.607

OLIG3

0.578

FERD3L

0.568

NEUROG2

0.551

ZNF260

0.509

ZMAT1

0.509

HERC2

0.502

EIPR1

0.497

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EIPR1	MYT1L	ENSSSCP00000023668	ENSSSCP00000056428	EARP complex and GARP complex interacting protein 1.	Myelin transcription factor 1 like.	0.497
FERD3L	MYT1L	ENSSSCP00000016299	ENSSSCP00000056428	Fer3 like bHLH transcription factor.	Myelin transcription factor 1 like.	0.568
HERC2	MYT1L	ENSSSCP00000016799	ENSSSCP00000056428	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	Myelin transcription factor 1 like.	0.502
LHX3	MYT1L	ENSSSCP00000035178	ENSSSCP00000056428	LIM/homeobox protein Lhx3; Required for the establishment of the specialized cells of the pituitary gland and the nervous system. Involved in the development of interneurons and motor neurons in cooperation with LDB1 and ISL1. Acts as a transcriptional activator. Binds to and activates the promoter of the alpha-glycoprotein gene, and synergistically enhances transcription from the prolactin promoter in cooperation with POU1F1/Pit-1 (By similarity).	Myelin transcription factor 1 like.	0.620
LHX3	NEUROD1	ENSSSCP00000035178	ENSSSCP00000016965	LIM/homeobox protein Lhx3; Required for the establishment of the specialized cells of the pituitary gland and the nervous system. Involved in the development of interneurons and motor neurons in cooperation with LDB1 and ISL1. Acts as a transcriptional activator. Binds to and activates the promoter of the alpha-glycoprotein gene, and synergistically enhances transcription from the prolactin promoter in cooperation with POU1F1/Pit-1 (By similarity).	Neurogenic differentiation factor.	0.473
LHX3	NEUROG2	ENSSSCP00000035178	ENSSSCP00000045329	LIM/homeobox protein Lhx3; Required for the establishment of the specialized cells of the pituitary gland and the nervous system. Involved in the development of interneurons and motor neurons in cooperation with LDB1 and ISL1. Acts as a transcriptional activator. Binds to and activates the promoter of the alpha-glycoprotein gene, and synergistically enhances transcription from the prolactin promoter in cooperation with POU1F1/Pit-1 (By similarity).	Neurogenin-2.	0.455
MYT1L	EIPR1	ENSSSCP00000056428	ENSSSCP00000023668	Myelin transcription factor 1 like.	EARP complex and GARP complex interacting protein 1.	0.497
MYT1L	FERD3L	ENSSSCP00000056428	ENSSSCP00000016299	Myelin transcription factor 1 like.	Fer3 like bHLH transcription factor.	0.568
MYT1L	HERC2	ENSSSCP00000056428	ENSSSCP00000016799	Myelin transcription factor 1 like.	HECT and RLD domain containing E3 ubiquitin protein ligase 2.	0.502
MYT1L	LHX3	ENSSSCP00000056428	ENSSSCP00000035178	Myelin transcription factor 1 like.	LIM/homeobox protein Lhx3; Required for the establishment of the specialized cells of the pituitary gland and the nervous system. Involved in the development of interneurons and motor neurons in cooperation with LDB1 and ISL1. Acts as a transcriptional activator. Binds to and activates the promoter of the alpha-glycoprotein gene, and synergistically enhances transcription from the prolactin promoter in cooperation with POU1F1/Pit-1 (By similarity).	0.620
MYT1L	NEUROD1	ENSSSCP00000056428	ENSSSCP00000016965	Myelin transcription factor 1 like.	Neurogenic differentiation factor.	0.717
MYT1L	NEUROD2	ENSSSCP00000056428	ENSSSCP00000037557	Myelin transcription factor 1 like.	Neurogenic differentiation factor.	0.607
MYT1L	NEUROG2	ENSSSCP00000056428	ENSSSCP00000045329	Myelin transcription factor 1 like.	Neurogenin-2.	0.551
MYT1L	OLIG3	ENSSSCP00000056428	ENSSSCP00000004490	Myelin transcription factor 1 like.	Oligodendrocyte transcription factor 3.	0.578
MYT1L	ZMAT1	ENSSSCP00000056428	ENSSSCP00000059056	Myelin transcription factor 1 like.	Zinc finger matrin-type 1.	0.509
MYT1L	ZNF260	ENSSSCP00000056428	ENSSSCP00000037009	Myelin transcription factor 1 like.	Zinc finger protein 260.	0.509
NEUROD1	LHX3	ENSSSCP00000016965	ENSSSCP00000035178	Neurogenic differentiation factor.	LIM/homeobox protein Lhx3; Required for the establishment of the specialized cells of the pituitary gland and the nervous system. Involved in the development of interneurons and motor neurons in cooperation with LDB1 and ISL1. Acts as a transcriptional activator. Binds to and activates the promoter of the alpha-glycoprotein gene, and synergistically enhances transcription from the prolactin promoter in cooperation with POU1F1/Pit-1 (By similarity).	0.473
NEUROD1	MYT1L	ENSSSCP00000016965	ENSSSCP00000056428	Neurogenic differentiation factor.	Myelin transcription factor 1 like.	0.717
NEUROD2	MYT1L	ENSSSCP00000037557	ENSSSCP00000056428	Neurogenic differentiation factor.	Myelin transcription factor 1 like.	0.607
NEUROG2	LHX3	ENSSSCP00000045329	ENSSSCP00000035178	Neurogenin-2.	LIM/homeobox protein Lhx3; Required for the establishment of the specialized cells of the pituitary gland and the nervous system. Involved in the development of interneurons and motor neurons in cooperation with LDB1 and ISL1. Acts as a transcriptional activator. Binds to and activates the promoter of the alpha-glycoprotein gene, and synergistically enhances transcription from the prolactin promoter in cooperation with POU1F1/Pit-1 (By similarity).	0.455