STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PICK1Protein interacting with PRKCA 1. (477 aa)    
Predicted Functional Partners:
GRIP2
Glutamate receptor interacting protein 2.
   
 0.922
TSPAN7
Tetraspanin.
     
 0.920
GRIA2
Glutamate ionotropic receptor AMPA type subunit 2.
    
 0.907
GOLGA3
Golgin A3.
      
 0.812
GRIA3
Glutamate ionotropic receptor AMPA type subunit 3.
    
 0.803
PRKCA
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
    
 0.790
GRIP1
Glutamate receptor interacting protein 1.
    
 0.769
GRIA1
Glutamate ionotropic receptor AMPA type subunit 1.
    
 0.768
ICA1L
Islet cell autoantigen 1 like.
    
 
 0.753
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
    
 0.726
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.