STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RIPPLY1Ripply transcriptional repressor 1. (185 aa)    
Predicted Functional Partners:
TLE1
TLE family member 1, transcriptional corepressor.
    
 
 0.523
TBC1D8B
TBC1 domain family member 8B.
      
 0.517
TCF7L1
HMG box domain-containing protein.
      
 0.473
MESP2
Mesoderm posterior bHLH transcription factor 2.
      
 0.471
TRIM67
Tripartite motif containing 67.
      
 0.426
GLIPR2
GLI pathogenesis related 2; Belongs to the CRISP family.
      
 0.406
PCDH18
Protocadherin 18.
      
 0.402
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.