STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2MUbiquitin conjugating enzyme E2 M; Belongs to the ubiquitin-conjugating enzyme family. (215 aa)    
Predicted Functional Partners:
NEDD8
NEDD8 ubiquitin like modifier.
   
 0.998
UBA3
Ubiquitin like modifier activating enzyme 3.
    
 0.994
CUL1
Cullin 1; Belongs to the cullin family.
    
 
 0.966
RBX1
E3 ubiquitin-protein ligase RBX1.
    
 0.937
DCUN1D2
DCN1-like protein.
    
 0.910
UBA1
Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
    
 0.872
A0A5G2RGD2_PIG
Zf-rbx1 domain-containing protein.
    
 
 0.857
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.846
DCUN1D5
DCN1-like protein.
    
 0.841
CUL4A
Cullin 4A; Belongs to the cullin family.
    
 0.791
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.