TNRC6B protein (Sus scrofa) - STRING interaction network

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Score

TNRC6B

Trinucleotide repeat containing adaptor 6B. (1868 aa)

Predicted Functional Partners:

AGO1

0.738

AGO4

0.738

AGO2

0.728

CNOT1

0.634

GPCPD1

0.469

CHID1

0.469

CNOT9

0.454

MAP3K2

0.451

PRTG

0.448

ADSL

0.438

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ADSL	TNRC6B	ENSSSCP00000000082	ENSSSCP00000058109	Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.	Trinucleotide repeat containing adaptor 6B.	0.438
AGO1	AGO2	ENSSSCP00000034205	ENSSSCP00000059624	Argonaute RISC component 1; Belongs to the argonaute family.	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	0.932
AGO1	AGO4	ENSSSCP00000034205	ENSSSCP00000055349	Argonaute RISC component 1; Belongs to the argonaute family.	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	0.913
AGO1	CNOT1	ENSSSCP00000034205	ENSSSCP00000023830	Argonaute RISC component 1; Belongs to the argonaute family.	CCR4-NOT transcription complex subunit 1.	0.411
AGO1	TNRC6B	ENSSSCP00000034205	ENSSSCP00000058109	Argonaute RISC component 1; Belongs to the argonaute family.	Trinucleotide repeat containing adaptor 6B.	0.738
AGO2	AGO1	ENSSSCP00000059624	ENSSSCP00000034205	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	Argonaute RISC component 1; Belongs to the argonaute family.	0.932
AGO2	AGO4	ENSSSCP00000059624	ENSSSCP00000055349	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	0.797
AGO2	CNOT1	ENSSSCP00000059624	ENSSSCP00000023830	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	CCR4-NOT transcription complex subunit 1.	0.594
AGO2	TNRC6B	ENSSSCP00000059624	ENSSSCP00000058109	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	Trinucleotide repeat containing adaptor 6B.	0.728
AGO4	AGO1	ENSSSCP00000055349	ENSSSCP00000034205	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	Argonaute RISC component 1; Belongs to the argonaute family.	0.913
AGO4	AGO2	ENSSSCP00000055349	ENSSSCP00000059624	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	0.797
AGO4	CNOT1	ENSSSCP00000055349	ENSSSCP00000023830	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	CCR4-NOT transcription complex subunit 1.	0.411
AGO4	TNRC6B	ENSSSCP00000055349	ENSSSCP00000058109	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	Trinucleotide repeat containing adaptor 6B.	0.738
CHID1	TNRC6B	ENSSSCP00000063918	ENSSSCP00000058109	Chitinase domain containing 1.	Trinucleotide repeat containing adaptor 6B.	0.469
CNOT1	AGO1	ENSSSCP00000023830	ENSSSCP00000034205	CCR4-NOT transcription complex subunit 1.	Argonaute RISC component 1; Belongs to the argonaute family.	0.411
CNOT1	AGO2	ENSSSCP00000023830	ENSSSCP00000059624	CCR4-NOT transcription complex subunit 1.	Protein argonaute-2; Required for RNA-mediated gene silencing (RNAi) by the RNA- induced silencing complex (RISC). The 'minimal RISC' appears to include AGO2 bound to a short guide RNA such as a microRNA (miRNA) or short interfering RNA (siRNA). These guide RNAs direct RISC to complementary mRNAs that are targets for RISC-mediated gene silencing. The precise mechanism of gene silencing depends on the degree of complementarity between the miRNA or siRNA and its target. Binding of RISC to a perfectly complementary mRNA generally results in silencing due to endonucleolytic cleavage of the [...]	0.594
CNOT1	AGO4	ENSSSCP00000023830	ENSSSCP00000055349	CCR4-NOT transcription complex subunit 1.	Protein argonaute-4; Required for RNA-mediated gene silencing (RNAi). Binds to short RNAs such as microRNAs (miRNAs) and represses the translation of mRNAs which are complementary to them. Lacks endonuclease activity and does not appear to cleave target mRNAs.	0.411
CNOT1	CNOT9	ENSSSCP00000023830	ENSSSCP00000074173	CCR4-NOT transcription complex subunit 1.	CCR4-NOT transcription complex subunit 9.	0.999
CNOT1	TNRC6B	ENSSSCP00000023830	ENSSSCP00000058109	CCR4-NOT transcription complex subunit 1.	Trinucleotide repeat containing adaptor 6B.	0.634
CNOT9	CNOT1	ENSSSCP00000074173	ENSSSCP00000023830	CCR4-NOT transcription complex subunit 9.	CCR4-NOT transcription complex subunit 1.	0.999