STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CWC15CWC15 spliceosome associated protein homolog. (254 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5-like protein.
   
 0.994
PRPF19
Pre-mRNA-processing factor 19.
    
 0.992
SNW1
SNW domain-containing protein 1 isoform 2.
   
 0.991
BUD31
Protein BUD31 homolog isoform X2.
   
 0.984
PRPF8
Pre-mRNA processing factor 8.
    
 0.984
SNRPF
Sm domain-containing protein.
   
 0.981
EFTUD2
116 kDa U5 small nuclear ribonucleoprotein component.
    
 0.981
CTNNBL1
DUF1716 domain-containing protein.
    
 0.980
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.980
XAB2
XPA binding protein 2.
    
 0.979
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.