STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TNFAIP8TNF alpha induced protein 8. (212 aa)    
Predicted Functional Partners:
RIC8A
RIC8 guanine nucleotide exchange factor A.
      
 0.813
RASA3
RAS p21 protein activator 3.
      
 0.716
CDON
Cell adhesion associated, oncogene regulated.
      
 0.613
CCNDBP1
Cyclin-D1-binding protein 1.
      
 0.592
CSNK2A2
Casein kinase 2, alpha prime polypeptide; Belongs to the protein kinase superfamily.
      
 0.571
MCAT
Malonyl-CoA-acyl carrier protein transacylase.
      
 0.549
RGS3
Regulator of G protein signaling 3.
      
 0.547
GDI2
Rab GDP dissociation inhibitor beta; Regulates the GDP/GTP exchange reaction of most Rab proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP to them.
      
 0.520
MAP3K8
Mitogen-activated protein kinase kinase kinase 8.
      
 0.422
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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