STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA6Importin subunit alpha; Functions in nuclear protein import. (578 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.976
ZBTB25
Zinc finger and BTB domain-containing protein 25 isoform X4.
   
 
 0.848
USHBP1
USH1 protein network component harmonin binding protein 1.
      
 0.785
NUP153
Nucleoporin 153.
   
 
 0.773
GMCL1
BTB domain-containing protein.
    
 
 0.726
DNAJB4
DnaJ heat shock protein family (Hsp40) member B4.
   
 
 0.719
EFHB
EF-hand domain family member B.
      
 0.714
USP33
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
   
 
 0.693
LRFN4
Leucine-rich repeat and fibronectin type-III domain-containing protein 4 isoform X1.
    
 
 0.690
ESPNL
Espin like.
    
 
 0.689
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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