STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL1Synaptotagmin like 1. (602 aa)    
Predicted Functional Partners:
TBC1D10A
TBC1 domain family member 10A isoform 2.
     
 0.902
RAB27A
Ras-related protein Rab-27A; Small GTPase which cycles between active GTP-bound and inactive GDP-bound states. In its active state, binds to a variety of effector proteins to regulate homeostasis of late endocytic pathway, including endosomal positioning, maturation and secretion. Plays a role in cytotoxic granule exocytosis in lymphocytes. Required for both granule maturation and granule docking and priming at the immunologic synapse.
   
 
 0.818
ECEL1
Endothelin-converting enzyme-like 1 isoform 1.
   
  
 0.765
THEMIS2
Thymocyte selection associated family member 2.
      
 0.762
CCDC60
Coiled-coil domain containing 60.
      
 0.725
CHRND
Cholinergic receptor nicotinic delta subunit.
      
 0.685
MYRIP
Myosin VIIA and Rab interacting protein.
      
 0.672
EPS8L2
EPS8 like 2.
      
 0.654
UBXN11
UBX domain protein 11.
      
 0.648
PKN3
Protein kinase N3.
   
  
 0.647
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.