STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAFA5TAFA chemokine like family member 5. (179 aa)    
Predicted Functional Partners:
WDR6
WD repeat domain 6.
      
 0.524
RORB
RAR related orphan receptor B.
      
 0.516
TMEM132D
Transmembrane protein 132D.
      
 0.499
DCLK1
Doublecortin like kinase 1.
      
 0.497
CITED1
Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1.
      
 0.468
RMDN2
Regulator of microtubule dynamics 2.
      
 0.455
S1PR2
Sphingosine 1-phosphate receptor 2.
      
 0.407
CSMD1
CUB and Sushi multiple domains 1.
  
   
 0.401
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.