STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CC2D1ACoiled-coil and C2 domain containing 1A. (981 aa)    
Predicted Functional Partners:
CAND2
Cullin associated and neddylation dissociated 2 (putative).
      
 0.739
PPP1R3E
Protein phosphatase 1 regulatory subunit 3E.
      
 0.727
BROX
BRO1 domain and CAAX motif containing.
   
  
 0.672
PTPRS
Protein tyrosine phosphatase receptor type S.
      
 0.670
CHMP5
Uncharacterized protein.
      
 0.664
PDE9A
Phosphodiesterase.
      
 0.609
ZSWIM4
Zinc finger SWIM-type containing 4.
   
  
 0.582
PLEKHA8
Pleckstrin homology domain containing A8.
      
 0.573
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.565
CHMP4B
Charged multivesicular body protein 4B.
    
 
 0.547
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.