Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A287ABE6_PIG | RNF165 | ENSSSCP00000041328 | ENSSSCP00000061273 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ring finger protein 165. | 0.862 |
A0A287ABE6_PIG | UBB | ENSSSCP00000041328 | ENSSSCP00000019108 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin B. | 0.660 |
A0A287ABE6_PIG | UBC | ENSSSCP00000041328 | ENSSSCP00000062692 | UBIQUITIN_CONJUGAT_2 domain-containing protein. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.660 |
ARFGAP3 | RNF165 | ENSSSCP00000032176 | ENSSSCP00000061273 | ADP ribosylation factor GTPase activating protein 3. | Ring finger protein 165. | 0.647 |
ARFGAP3 | SRP54 | ENSSSCP00000032176 | ENSSSCP00000002136 | ADP ribosylation factor GTPase activating protein 3. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.594 |
RNF165 | A0A287ABE6_PIG | ENSSSCP00000061273 | ENSSSCP00000041328 | Ring finger protein 165. | UBIQUITIN_CONJUGAT_2 domain-containing protein. | 0.862 |
RNF165 | ARFGAP3 | ENSSSCP00000061273 | ENSSSCP00000032176 | Ring finger protein 165. | ADP ribosylation factor GTPase activating protein 3. | 0.647 |
RNF165 | SKOR2 | ENSSSCP00000061273 | ENSSSCP00000006181 | Ring finger protein 165. | SKI family transcriptional corepressor 2. | 0.618 |
RNF165 | SLC39A6 | ENSSSCP00000061273 | ENSSSCP00000027535 | Ring finger protein 165. | Solute carrier family 39 member 6. | 0.702 |
RNF165 | SRP54 | ENSSSCP00000061273 | ENSSSCP00000002136 | Ring finger protein 165. | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | 0.630 |
RNF165 | UBB | ENSSSCP00000061273 | ENSSSCP00000019108 | Ring finger protein 165. | Ubiquitin B. | 0.807 |
RNF165 | UBC | ENSSSCP00000061273 | ENSSSCP00000062692 | Ring finger protein 165. | Ubiquitin-related; [Ubiquitin]: Exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked: Lys-6-linked may be involved in DNA repa [...] | 0.962 |
RNF165 | UBE2D2 | ENSSSCP00000061273 | ENSSSCP00000033361 | Ring finger protein 165. | Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. | 0.974 |
RNF165 | UBE2D3 | ENSSSCP00000061273 | ENSSSCP00000057683 | Ring finger protein 165. | Ubiquitin-conjugating enzyme E2 D2; Accepts ubiquitin from the E1 complex and catalyzes its covalent attachment to other proteins. In vitro catalyzes 'Lys-48'- linked polyubiquitination. Mediates the selective degradation of short- lived and abnormal proteins. Functions in the E6/E6-AP-induced ubiquitination of p53/TP53. Mediates ubiquitination of PEX5 and autoubiquitination of STUB1 and TRAF6. Involved in the signal-induced conjugation and subsequent degradation of NFKBIA, FBXW2-mediated GCM1 ubiquitination and degradation, MDM2-dependent degradation of p53/TP53 and the activation of [...] | 0.862 |
RNF165 | ZFYVE16 | ENSSSCP00000061273 | ENSSSCP00000015016 | Ring finger protein 165. | Zinc finger FYVE domain-containing protein 16. | 0.637 |
SKOR2 | RNF165 | ENSSSCP00000006181 | ENSSSCP00000061273 | SKI family transcriptional corepressor 2. | Ring finger protein 165. | 0.618 |
SKOR2 | SLC39A6 | ENSSSCP00000006181 | ENSSSCP00000027535 | SKI family transcriptional corepressor 2. | Solute carrier family 39 member 6. | 0.572 |
SLC39A6 | RNF165 | ENSSSCP00000027535 | ENSSSCP00000061273 | Solute carrier family 39 member 6. | Ring finger protein 165. | 0.702 |
SLC39A6 | SKOR2 | ENSSSCP00000027535 | ENSSSCP00000006181 | Solute carrier family 39 member 6. | SKI family transcriptional corepressor 2. | 0.572 |
SRP54 | ARFGAP3 | ENSSSCP00000002136 | ENSSSCP00000032176 | Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. | ADP ribosylation factor GTPase activating protein 3. | 0.594 |
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