STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSCAN12Zinc finger and SCAN domain-containing protein 12 isoform X1. (611 aa)    
Predicted Functional Partners:
ARHGAP4
Rho GTPase activating protein 4.
      
 0.572
CAPN13
Calpain 13; Belongs to the peptidase C2 family.
   
 
 0.559
OR2B6
Olfactory receptor.
      
 0.553
YIPF6
Protein YIPF.
   
 
 0.539
F1RPI1_PIG
Olfactory receptor.
      
 0.514
COMMD5
COMM domain containing 5.
      
 0.503
BRINP1
BMP/retinoic acid-inducible neural-specific protein 1 isoform X1.
      
 0.469
C1QTNF6
C1q domain-containing protein.
      
 0.463
TLK1
Tousled like kinase 1.
   
  
 0.459
FAM83A
Family with sequence similarity 83 member A.
    
 
 0.450
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.