STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A5G2QED1_PIGPeriod_C domain-containing protein. (481 aa)    
Predicted Functional Partners:
PER3
PAS domain-containing protein.
 
      0.897
CRY1
Cryptochrome circadian regulator 1.
   
 
 0.780
CRY2
Cryptochrome circadian regulator 2.
   
 
 0.774
TIMELESS
Timeless circadian regulator.
   
 
 0.770
CSNK1D
Casein kinase 1 delta.
    
 
 0.718
ARNTL
Aryl hydrocarbon receptor nuclear translocator like.
    
 
 0.625
BHLHE41
Class E basic helix-loop-helix protein 41.
    
 
 0.614
LOC100523244
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.607
TEF
TEF transcription factor, PAR bZIP family member.
   
 
 0.557
NR1D1
Nuclear receptor subfamily 1 group D member 1 isoform X2.
   
 
 0.527
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.