STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SAFB2Scaffold attachment factor B2. (976 aa)    
Predicted Functional Partners:
ACIN1
Apoptotic chromatin condensation inducer 1.
   
 
 0.804
ZNF358
Zinc finger protein 358.
    
 
 0.746
LSG1
Large 60S subunit nuclear export GTPase 1.
   
  
 0.737
SAFB
Scaffold attachment factor B.
  
  
0.657
SPEN
Spen family transcriptional repressor.
   
  
 0.615
LBR
Lamin-B receptor.
      
 0.610
A0A286ZJ84_PIG
Uncharacterized protein.
      
 0.569
HNRNPU
Heterogeneous nuclear ribonucleoprotein U isoform a.
   
 
 0.540
KHDRBS1
KH RNA binding domain containing, signal transduction associated 1.
   
 
 0.529
CCNL2
Cyclin-L2 isoform A; Belongs to the cyclin family.
   
  
 0.528
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.