STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VAT1LVesicle amine transport 1 like. (432 aa)    
Predicted Functional Partners:
SYCE1L
Uncharacterized protein.
      
 0.849
CNTNAP4
Uncharacterized protein.
   
  
 0.780
WWOX
WW domain containing oxidoreductase.
   
 0.731
FASN
Uncharacterized protein.
 
 0.596
FN3K
Fructosamine 3 kinase.
   
  
 0.582
STRN4
Striatin-4 isoform 2.
      
 0.574
HSDL2
Hydroxysteroid dehydrogenase like 2.
  
 0.552
JAKMIP2
Janus kinase and microtubule interacting protein 2.
   
  
 0.535
DESI1
Desumoylating isopeptidase 1.
      
 0.526
WDR18
WD repeat-containing protein 18.
      
 0.525
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.