STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAF9Transcription initiation factor TFIID subunit 9. (265 aa)    
Predicted Functional Partners:
TAF6
TATA-box binding protein associated factor 6.
   
 0.998
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
   
 0.995
TAF12
Transcription initiation factor TFIID subunit 12 isoform X1.
   
 0.994
TAF5
Transcription initiation factor TFIID subunit 5 isoform 1.
    
 0.990
SGF29
SAGA complex associated factor 29.
   
 0.985
TAF1
Transcription initiation factor TFIID subunit.
    
 0.985
TAF2
TATA-box binding protein associated factor 2.
    
 0.978
TAF8
TATA-box binding protein associated factor 8.
   
 0.972
TAF11
Transcription initiation factor TFIID subunit 11 isoform 1.
   
 0.965
TAF4
TATA-box binding protein associated factor 4.
    
 0.962
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.