STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL19A1Collagen type XIX alpha 1 chain. (1132 aa)    
Predicted Functional Partners:
NOSTRIN
Nitric oxide synthase trafficking.
    
 
 0.906
ZNHIT3
Zinc finger HIT-type containing 3.
      
 0.826
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.761
NUBPL
Nucleotide binding protein like.
      
 0.727
N4BP2
NEDD4 binding protein 2.
      
 0.695
MARVELD2
MARVEL domain-containing protein 2 isoform 1.
      
 0.669
LOC100514786
ABC transporter domain-containing protein.
   
 
 0.623
STAU2
Staufen double-stranded RNA binding protein 2.
    
 
 0.612
XRCC2
X-ray repair cross complementing 2.
      
 0.606
RPL31
60S ribosomal protein L31; Belongs to the eukaryotic ribosomal protein eL31 family.
    
 
 0.602
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.