STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TFCP2Transcription factor CP2. (467 aa)    
Predicted Functional Partners:
ZBTB14
Zinc finger and BTB domain-containing protein 14 isoform X1.
    
 
 0.729
THYN1
Thymocyte nuclear protein 1 isoform 1.
      
 0.669
CCDC88A
Coiled-coil domain containing 88A.
      
 0.660
GATAD2B
GATA zinc finger domain containing 2B.
    
 
 0.623
LYAR
Ly1 antibody reactive.
      
 0.612
LRRFIP2
LRR binding FLII interacting protein 2.
      
 0.611
SSRP1
FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...]
      
 0.600
TAGLN3
Transgelin-3.
   
  
 0.588
PID1
PID domain-containing protein.
      
 0.578
GATAD2A
GATA zinc finger domain containing 2A.
    
 
 0.570
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.