STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZBTB38Zinc finger and BTB domain containing 38. (1202 aa)    
Predicted Functional Partners:
ATP5MD
ATP synthase membrane subunit DAPIT.
      
 0.777
STRADB
STE20 related adaptor beta.
      
 0.770
HACD4
Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase; Catalyzes the third of the four reactions of the long-chain fatty acids elongation cycle. This endoplasmic reticulum-bound enzymatic process, allows the addition of two carbons to the chain of long- and very long-chain fatty acids/VLCFAs per cycle. This enzyme catalyzes the dehydration of the 3-hydroxyacyl-CoA intermediate into trans-2,3-enoyl-CoA, within each cycle of fatty acid elongation. Thereby, it participates to the production of VLCFAs of different chain lengths that are involved in multiple biological processes as precursors [...]
    
 
 0.766
ACSS3
Acyl-CoA synthetase short-chain family member 3, mitochondrial isoform 1.
    
 
 0.730
PKN2
Serine/threonine-protein kinase N2 isoform 1.
    
 
 0.695
PIK3AP1
Phosphoinositide-3-kinase adaptor protein 1.
      
 0.618
CRBN
Cereblon.
    
 
 0.609
RBBP6
RB binding protein 6, ubiquitin ligase.
    
 
 0.576
RASA2
RAS p21 protein activator 2.
      
 0.572
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
      
 0.557
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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