STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RILPL1Rab interacting lysosomal protein like 1. (411 aa)    
Predicted Functional Partners:
RAB10
Uncharacterized protein.
    
 
 0.840
RAB29
RAB29, member RAS oncogene family.
      
 0.835
PPM1H
Protein phosphatase, Mg2+/Mn2+ dependent 1H.
      
 0.788
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.709
RAB35
Uncharacterized protein.
      
 0.659
RAB3A
Ras-related protein Rab-3A; Small GTP-binding protein that plays a central role in regulated exocytosis and secretion. Controls the recruitment, tethering and docking of secretory vesicles to the plasma membrane (By similarity). Upon stimulation, switches to its active GTP-bound form, cycles to vesicles and recruits effectors such as RIMS1, RIMS2, Rabphilin-3A/RPH3A, RPH3AL or SYTL4 to help the docking of vesicules onto the plasma membrane (By similarity). Upon GTP hydrolysis by GTPase-activating protein, dissociates from the vesicle membrane allowing the exocytosis to proceed (By simi [...]
      
 0.654
RAB39B
RAB39B, member RAS oncogene family.
    
 
 0.623
RAB8A
Uncharacterized protein.
    
 
 0.621
RINT1
RAD50-interacting protein 1 isoform X1.
      
 0.583
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.576
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.