STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UHMK1Serine/threonine-protein kinase Kist isoform 1. (419 aa)    
Predicted Functional Partners:
CDKN1B
p27Kip1.
   
 0.761
CHMP5
Uncharacterized protein.
      
 0.729
STYXL1
Serine/threonine/tyrosine-interacting-like protein 1 isoform X1.
    
 
 0.655
ATP6V1H
V-type proton ATPase subunit H; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit H activates the ATPase activity of the enzyme and couples ATPase activity to proton flow. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Involved in the endocytosis mediated by clathrin- coated pits, required for the formation of endosomes (By similarity).
   
 
 0.617
NUDT11
Nudix hydrolase domain-containing protein.
      
 0.586
NUDT11-2
Nudix hydrolase 11.
      
 0.586
TRIM39
E3 ubiquitin-protein ligase TRIM39 isoform 2.
    
 
 0.582
UAP1
UDP-N-acetylhexosamine pyrophosphorylase isoform b.
 
    
 0.551
GPR55
G-protein coupled receptor 55; Belongs to the G-protein coupled receptor 1 family.
      
 0.543
KIF15
Kinesin family member 15; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.522
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.