STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC23Tetratricopeptide repeat domain 23. (456 aa)    
Predicted Functional Partners:
SMPDL3A
Acid sphingomyelinase-like phosphodiesterase.
      
 0.761
BLMH
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.721
IQCE
IQ motif containing E.
    
 
 0.687
KRT10
Keratin 10; Belongs to the intermediate filament family.
    
 
 0.668
EFCAB7
EF-hand calcium binding domain 7.
    
 
 0.615
SPAM1
Hyaluronidase.
      
 0.611
UBA1
Ubiquitin like modifier activating enzyme 1; Belongs to the ubiquitin-activating E1 family.
      
 0.609
TXNDC15
Thioredoxin domain-containing protein.
      
 0.571
FAM92A
Family with sequence similarity 92 member A.
      
 0.546
DPH1
2-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2.
      
 0.528
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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