STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRRC71Leucine rich repeat containing 71. (598 aa)    
Predicted Functional Partners:
TEKT3
Tektin-3 isoform X1.
   
  
 0.798
TSNAXIP1
Translin-associated factor X-interacting protein 1 isoform a.
   
   0.790
LYPD6B
LY6/PLAUR domain containing 6B.
   
  
 0.782
ADAMTS19
ADAM metallopeptidase with thrombospondin type 1 motif 19.
      
 0.780
NRN1
Neuritin 1.
   
  
 0.726
NME8
NME/NM23 family member 8.
   
 
 0.675
PLB1
Phospholipase B1.
      
 0.668
RSPH4A
Radial spoke head protein 4 homolog A isoform 1.
   
 
 0.655
RSPH6A
Radial spoke head 6 homolog A.
   
 
 0.655
PEAR1
Platelet endothelial aggregation receptor 1.
 
    
 0.588
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.