LSM14A protein (Sus scrofa) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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protein homology

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[Homology]

Score

LSM14A

Uncharacterized protein. (475 aa)

Predicted Functional Partners:

DDX6

0.963

EDC3

0.940

DCP2

0.896

EIF4ENIF1

0.884

THAP9

0.853

DCP1A

0.803

CAPRIN1

0.714

PATL1

0.707

YBX1

0.686

EDC4

0.679

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CAPRIN1	DCP1A	ENSSSCP00000056071	ENSSSCP00000023625	Cell cycle associated protein 1.	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	0.405
CAPRIN1	DDX6	ENSSSCP00000056071	ENSSSCP00000046682	Cell cycle associated protein 1.	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	0.502
CAPRIN1	LSM14A	ENSSSCP00000056071	ENSSSCP00000067330	Cell cycle associated protein 1.	Uncharacterized protein.	0.714
DCP1A	CAPRIN1	ENSSSCP00000023625	ENSSSCP00000056071	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Cell cycle associated protein 1.	0.405
DCP1A	DCP2	ENSSSCP00000023625	ENSSSCP00000015112	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Decapping mRNA 2.	0.998
DCP1A	DDX6	ENSSSCP00000023625	ENSSSCP00000046682	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	0.979
DCP1A	EDC3	ENSSSCP00000023625	ENSSSCP00000002082	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Enhancer of mRNA decapping 3.	0.986
DCP1A	EDC4	ENSSSCP00000023625	ENSSSCP00000002990	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Enhancer of mRNA decapping 4.	0.986
DCP1A	LSM14A	ENSSSCP00000023625	ENSSSCP00000067330	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	Uncharacterized protein.	0.803
DCP1A	PATL1	ENSSSCP00000023625	ENSSSCP00000047869	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	PAT1 homolog 1, processing body mRNA decay factor.	0.935
DCP2	DCP1A	ENSSSCP00000015112	ENSSSCP00000023625	Decapping mRNA 2.	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	0.998
DCP2	DDX6	ENSSSCP00000015112	ENSSSCP00000046682	Decapping mRNA 2.	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	0.980
DCP2	EDC3	ENSSSCP00000015112	ENSSSCP00000002082	Decapping mRNA 2.	Enhancer of mRNA decapping 3.	0.989
DCP2	EDC4	ENSSSCP00000015112	ENSSSCP00000002990	Decapping mRNA 2.	Enhancer of mRNA decapping 4.	0.992
DCP2	LSM14A	ENSSSCP00000015112	ENSSSCP00000067330	Decapping mRNA 2.	Uncharacterized protein.	0.896
DCP2	PATL1	ENSSSCP00000015112	ENSSSCP00000047869	Decapping mRNA 2.	PAT1 homolog 1, processing body mRNA decay factor.	0.988
DDX6	CAPRIN1	ENSSSCP00000046682	ENSSSCP00000056071	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	Cell cycle associated protein 1.	0.502
DDX6	DCP1A	ENSSSCP00000046682	ENSSSCP00000023625	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	mRNA-decapping enzyme 1A; Necessary for the degradation of mRNAs, both in normal mRNA turnover and in nonsense-mediated mRNA decay. Removes the 7-methyl guanine cap structure from mRNA molecules, yielding a 5'-phosphorylated mRNA fragment and 7m-GDP. Contributes to the transactivation of target genes after stimulation by TGFB1; Belongs to the DCP1 family.	0.979
DDX6	DCP2	ENSSSCP00000046682	ENSSSCP00000015112	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	Decapping mRNA 2.	0.980
DDX6	EDC3	ENSSSCP00000046682	ENSSSCP00000002082	Putative ATP-dependent RNA helicase DDX6 isoform X1; Belongs to the DEAD box helicase family.	Enhancer of mRNA decapping 3.	0.996