STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD4FERM and PDZ domain containing 4. (1330 aa)    
Predicted Functional Partners:
OTULINL
OTU deubiquitinase with linear linkage specificity like.
      
 0.829
EVI2B
Ecotropic viral integration site 2B.
      
 0.764
SEZ6L2
Seizure related 6 homolog like 2.
   
  
 0.636
NCEH1
Neutral cholesterol ester hydrolase 1 isoform b.
      
 0.609
GPSM2
G-protein-signaling modulator 2 isoform X1.
    
 
 0.598
UPRT
Uracil phosphoribosyltransferase homolog.
      
 0.571
DDN
Dendrin.
   
  
 0.531
RGS8
Regulator of G protein signaling 8.
   
  
 0.526
TSPAN6
Tetraspanin.
      
 0.520
LOC100739719
Tetraspanin.
      
 0.520
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.