STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YJU2YJU2 splicing factor homolog. (377 aa)    
Predicted Functional Partners:
CWC25
Pre-mRNA-splicing factor CWC25 homolog.
   
 0.991
PRPF19
Pre-mRNA-processing factor 19.
    
 0.985
SNRNP200
U5 small nuclear ribonucleoprotein 200 kDa helicase isoform X1.
    
 0.980
CWC22
CWC22 spliceosome associated protein homolog.
    
 0.979
DHX38
DEAH-box helicase 38.
   
 
 0.974
CDC5L
Cell division cycle 5-like protein.
    
 
 0.973
XAB2
XPA binding protein 2.
    
 
 0.973
PRPF8
Pre-mRNA processing factor 8.
    
 0.972
SYF2
SYF2 pre-mRNA splicing factor.
    
 
 0.971
BUD31
Protein BUD31 homolog isoform X2.
    
 
 0.970
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.