STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM35Tripartite motif containing 35. (492 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.781
TRIM32
Tripartite motif containing 32.
    
 
0.695
TRIM66
Tripartite motif containing 66.
      
 0.688
CNOT8
CCR4-NOT transcription complex subunit 8.
   
 
 0.591
RNF111
Ring finger protein 111.
   
  
 0.576
TRIM3
Tripartite motif containing 3.
      
 0.571
CNOT7
CCR4-NOT transcription complex subunit 7 isoform 1.
    
 
 0.568
TRIM37
Tripartite motif containing 37.
    
 
 0.527
CCDC27
Uncharacterized protein.
      
 0.525
TRIM45
Tripartite motif-containing protein 45 isoform 1.
      
 0.516
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.