STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MND1Meiotic nuclear division protein 1 homolog; Required for proper homologous chromosome pairing and efficient cross-over and intragenic recombination during meiosis. Belongs to the MND1 family. (219 aa)    
Predicted Functional Partners:
PSMC3IP
PSMC3 interacting protein.
   
 
 0.976
MSH5
DNA_MISMATCH_REPAIR_2 domain-containing protein.
   
  
 0.812
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
      
 0.778
SCGB3A1
Secretoglobin family 3A member 1.
      
 0.772
ADARB1
Adenosine deaminase RNA specific B1.
      
 0.763
PAICS
AIRC domain-containing protein.
   
  
 0.744
MSH4
MutS homolog 4.
   
  
 0.690
DNAJA3
DnaJ homolog subfamily A member 3, mitochondrial isoform 1.
      
 0.690
RAD51
DNA repair protein RAD51 homolog; Plays an important role in homologous strand exchange, a key step in DNA repair through homologous recombination. Binds to single and double-stranded DNA and exhibits DNA-dependent ATPase activity. Catalyzes the recognition of homology and strand exchange between homologous DNA partners to form a joint molecule between a processed DNA break and the repair template. Binds to single-stranded DNA in an ATP-dependent manner to form nucleoprotein filaments which are essential for the homology search and strand exchange. Belongs to the RecA family. RAD51 sub [...]
   
 
 0.680
NUF2
NUF2 component of NDC80 kinetochore complex.
   
  
 0.673
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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