STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANGEL1Angel homolog 1. (680 aa)    
Predicted Functional Partners:
A0A5G2QJF6_PIG
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.572
STRN4
Striatin-4 isoform 2.
      
 0.550
HIF1AN
Hypoxia inducible factor 1 subunit alpha inhibitor.
   
  
 0.547
CNOT8
CCR4-NOT transcription complex subunit 8.
   
  
 0.533
EIF4G3
Eukaryotic translation initiation factor 4 gamma 3.
    
 
 0.512
CNOT7
CCR4-NOT transcription complex subunit 7 isoform 1.
   
  
 0.511
NSUN6
NOP2/Sun RNA methyltransferase 6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.509
TMEM159
Transmembrane protein 159.
      
 0.505
NSUN2
NOP2/Sun RNA methyltransferase 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
      
 0.504
HEATR6
HEAT repeat containing 6.
      
 0.501
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.