STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFP90ZFP90 zinc finger protein. (656 aa)    
Predicted Functional Partners:
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.725
MTPN
Myotrophin.
    
 
 0.606
TRIM28
Tripartite motif containing 28.
   
 0.594
RBBP4
WD_REPEATS_REGION domain-containing protein.
    
 
 0.538
BPTF
Bromodomain PHD finger transcription factor.
    
 
 0.513
HNF1A
Hepatocyte nuclear factor 1-alpha isoform 2.
    
 
 0.512
ANKRD6
Ankyrin repeat domain-containing protein 6 isoform X2.
    
 
 0.509
SH3BP2
SH3 domain binding protein 2.
      
 0.503
TLE2
TLE family member 2, transcriptional corepressor.
    
 
 0.491
JAZF1
JAZF zinc finger 1.
    
 
 0.486
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.