STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL40Uncharacterized protein. (206 aa)    
Predicted Functional Partners:
MRPL46
39S ribosomal protein L46, mitochondrial.
   
 
 0.997
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.996
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.995
MRPL27
Mitochondrial ribosomal protein L27.
   
 
 0.995
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.994
MRPL16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.994
MRPL4
Mitochondrial ribosomal protein L4.
   
 
 0.994
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.994
MRPL30
39S ribosomal protein L30, mitochondrial.
   
 
 0.993
MRPL3
Mitochondrial ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.991
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.