TRA2A protein (Sus scrofa) - STRING interaction network

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Predicted Interactions

gene neighborhood

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[Homology]

Score

TRA2A

Transformer 2 alpha homolog. (294 aa)

Predicted Functional Partners:

SRSF3

0.845

SRSF1

0.833

SRSF7

0.801

RERG

0.780

STRBP

0.771

SRSF9

0.727

SRSF4

0.727

SRSF10

0.711

A0A286ZI50_PIG

0.694

MSI2

0.663

Your Current Organism:

Sus scrofa

NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
A0A286ZI50_PIG	SRSF1	ENSSSCP00000031134	ENSSSCP00000057405	RRM domain-containing protein.	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	0.809
A0A286ZI50_PIG	SRSF10	ENSSSCP00000031134	ENSSSCP00000051926	RRM domain-containing protein.	Serine and arginine rich splicing factor 10.	0.599
A0A286ZI50_PIG	SRSF3	ENSSSCP00000031134	ENSSSCP00000001699	RRM domain-containing protein.	Serine and arginine rich splicing factor 3.	0.876
A0A286ZI50_PIG	SRSF4	ENSSSCP00000031134	ENSSSCP00000059217	RRM domain-containing protein.	Serine and arginine rich splicing factor 4.	0.491
A0A286ZI50_PIG	SRSF7	ENSSSCP00000031134	ENSSSCP00000046977	RRM domain-containing protein.	Serine/arginine-rich splicing factor 7 isoform 1.	0.770
A0A286ZI50_PIG	SRSF9	ENSSSCP00000031134	ENSSSCP00000010572	RRM domain-containing protein.	Uncharacterized protein.	0.836
A0A286ZI50_PIG	TRA2A	ENSSSCP00000031134	ENSSSCP00000070828	RRM domain-containing protein.	Transformer 2 alpha homolog.	0.694
MSI2	SRSF10	ENSSSCP00000043030	ENSSSCP00000051926	Musashi RNA binding protein 2.	Serine and arginine rich splicing factor 10.	0.473
MSI2	TRA2A	ENSSSCP00000043030	ENSSSCP00000070828	Musashi RNA binding protein 2.	Transformer 2 alpha homolog.	0.663
RERG	STRBP	ENSSSCP00000000632	ENSSSCP00000005976	RAS like estrogen regulated growth inhibitor.	Spermatid perinuclear RNA binding protein.	0.515
RERG	TRA2A	ENSSSCP00000000632	ENSSSCP00000070828	RAS like estrogen regulated growth inhibitor.	Transformer 2 alpha homolog.	0.780
SRSF1	A0A286ZI50_PIG	ENSSSCP00000057405	ENSSSCP00000031134	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	RRM domain-containing protein.	0.809
SRSF1	SRSF10	ENSSSCP00000057405	ENSSSCP00000051926	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	Serine and arginine rich splicing factor 10.	0.991
SRSF1	SRSF3	ENSSSCP00000057405	ENSSSCP00000001699	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	Serine and arginine rich splicing factor 3.	0.965
SRSF1	SRSF4	ENSSSCP00000057405	ENSSSCP00000059217	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	Serine and arginine rich splicing factor 4.	0.589
SRSF1	SRSF7	ENSSSCP00000057405	ENSSSCP00000046977	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	Serine/arginine-rich splicing factor 7 isoform 1.	0.985
SRSF1	SRSF9	ENSSSCP00000057405	ENSSSCP00000010572	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	Uncharacterized protein.	0.928
SRSF1	TRA2A	ENSSSCP00000057405	ENSSSCP00000070828	Serine/arginine-rich splicing factor 1; Plays a role in preventing exon skipping, ensuring the accuracy of splicing and regulating alternative splicing. Interacts with other spliceosomal components, via the RS domains, to form a bridge between the 5'- and 3'-splice site binding components, U1 snRNP and U2AF. Can stimulate binding of U1 snRNP to a 5'-splice site- containing pre-mRNA. Binds to purine-rich RNA sequences, either the octamer, 5'-RGAAGAAC-3' (r=A or G) or the decamers, AGGACAGAGC/AGGACGAAGC. Binds preferentially to the 5'-CGAGGCG-3' motif in vitro. Three copies of the octame [...]	Transformer 2 alpha homolog.	0.833
SRSF10	A0A286ZI50_PIG	ENSSSCP00000051926	ENSSSCP00000031134	Serine and arginine rich splicing factor 10.	RRM domain-containing protein.	0.599
SRSF10	MSI2	ENSSSCP00000051926	ENSSSCP00000043030	Serine and arginine rich splicing factor 10.	Musashi RNA binding protein 2.	0.473