STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PPM1LProtein phosphatase, Mg2+/Mn2+ dependent 1L. (360 aa)    
Predicted Functional Partners:
MCF2L2
MCF.2 cell line derived transforming sequence-like 2.
      
 0.850
COLEC12
Collectin subfamily member 12.
   
 
 0.694
TBC1D16
TBC1 domain family member 16.
      
 0.652
IGSF11
Immunoglobulin superfamily member 11.
      
 0.642
AANAT
Aralkylamine N-acetyltransferase.
    
   0.626
CNFN
Cornifelin.
   
  
 0.617
KRTDAP
Keratinocyte differentiation-associated protein isoform 1.
      
 0.611
SMC4
Structural maintenance of chromosomes protein.
  
  
 0.606
NAALADL2
N-acetylated alpha-linked acidic dipeptidase like 2.
    
 
 0.595
ARL14
ADP ribosylation factor like GTPase 14; Belongs to the small GTPase superfamily. Arf family.
   
 
 0.593
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.