STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FASTKD5FAST kinase domains 5. (813 aa)    
Predicted Functional Partners:
UBOX5
U-box domain containing 5.
 
    
 0.569
GNRH2
Gonadoliberin; Stimulates the secretion of gonadotropins. Belongs to the GnRH family.
      
 0.503
THNSL2
Threonine synthase like 2.
      
 0.501
SLC35A3
Solute carrier family 35 member A3.
      
 0.493
DDX28
DEAD-box helicase 28.
      
 0.487
GRSF1
G-rich RNA sequence binding factor 1.
    
 
 0.484
TRMT61B
tRNA methyltransferase 61B.
      
 0.470
ASMTL
Acetylserotonin O-methyltransferase like.
      
 0.470
MALSU1
Mitochondrial assembly of ribosomal large subunit 1.
      
 0.469
DDRGK1
DDRGK domain-containing protein 1.
      
 0.469
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.