STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MID1E3 ubiquitin-protein ligase Midline-1 isoform 1. (667 aa)    
Predicted Functional Partners:
IGBP1
Uncharacterized protein.
    
 
 0.636
PLAC1
Placenta-specific protein 1.
      
 0.573
DPH2
2-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2.
      
 0.546
RTL1
Retrotransposon Gag like 1.
      
 0.525
MID1IP1
Mid1-interacting protein 1.
    
 
 0.517
OSCP1
Organic solute carrier partner 1.
      
 0.517
NOL3
Nucleolar protein 3.
      
 0.517
UNC5CL
Unc-5 family C-terminal like.
      
 0.514
ARHGEF17
DH domain-containing protein.
   
 
 0.499
ARHGEF19
Rho guanine nucleotide exchange factor 19 isoform X1.
      
 0.497
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.