STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACOD1Aconitate decarboxylase 1. (482 aa)    
Predicted Functional Partners:
TRMU
tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase.
   
 
 0.700
GTPBP3
GTP binding protein 3, mitochondrial.
   
 
 0.685
GLDC
Glycine cleavage system P protein; The glycine cleavage system catalyzes the degradation of glycine.
   
 
 0.679
AMT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 0.645
PYROXD1
Pyridine nucleotide-disulphide oxidoreductase domain 1.
  
 0.640
SQOR
Sulfide:quinone oxidoreductase, mitochondrial.
  
 0.640
AIFM1
Apoptosis inducing factor mitochondria associated 1.
  
 0.640
AIFM2
Apoptosis inducing factor mitochondria associated 2.
  
 0.640
AIFM3
Apoptosis inducing factor mitochondria associated 3.
  
 0.640
DMGDH
Dimethylglycine dehydrogenase.
  
 0.632
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.