STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZFYVE28Zinc finger FYVE-type containing 28. (913 aa)    
Predicted Functional Partners:
C1orf112
Chromosome 1 open reading frame 112.
      
 0.867
SLITRK1
SLIT and NTRK-like protein 1.
   
  
 0.732
CELF6
Uncharacterized protein.
   
  
 0.696
EPS8L3
EPS8 like 3.
      
 0.677
PDE7B
Phosphodiesterase.
   
  
 0.621
ATN1
Atrophin-1.
      
 0.611
EGFLAM
EGF like, fibronectin type III and laminin G domains.
      
 0.610
GSG1L
GSG1 like.
      
 0.610
PPP1R3D
Protein phosphatase 1 regulatory subunit.
      
 0.604
CABIN1
Calcineurin binding protein 1.
      
 0.599
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.