STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYB561Cytochrome b561; Secretory vesicle-specific electron transport protein. (259 aa)    
Predicted Functional Partners:
SLC31A1
High affinity copper uptake protein 1; High-affinity, saturable copper transporter involved in dietary copper uptake.
   
  
 0.740
ATP7B
Uncharacterized protein.
      
 0.704
PKDCC
Protein kinase domain containing, cytoplasmic.
      
 0.594
GPC1
Glypican 1; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family.
      
 0.572
CCS
Copper chaperone for superoxide dismutase; Delivers copper to copper zinc superoxide dismutase (SOD1). In the C-terminal section; belongs to the Cu-Zn superoxide dismutase family.
   
  
 0.555
STEAP4
Metalloreductase STEAP4.
      
 0.537
GSR
Glutathione reductase; Maintains high levels of reduced glutathione in the cytosol. Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
   
  
 0.530
OVOL2
Ovo like zinc finger 2.
      
 0.515
DBH
Dopamine beta-hydroxylase.
      
 0.514
SHROOM3
ASD2 domain-containing protein.
      
 0.514
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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