STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRHProtein tyrosine phosphatase receptor type H. (1123 aa)    
Predicted Functional Partners:
PPP4R4
Protein phosphatase 4 regulatory subunit 4.
    
 
 0.571
LRRTM4
Leucine rich repeat transmembrane neuronal 4.
    
 
 0.548
INPP5J
Inositol polyphosphate-5-phosphatase J.
   
 
 0.525
SBSN
Suprabasin.
    
 
 0.522
LOC102164418
Amidase domain-containing protein.
   
  
 0.517
GPATCH2L
G patch domain-containing protein 2-like isoform 1.
      
 0.514
UHRF1BP1L
UHRF1 binding protein 1 like.
      
 0.514
P2RX1
P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family.
    
 
 0.514
FKBP6
Peptidylprolyl isomerase.
    
 
 0.509
B3GNT2
Hexosyltransferase.
   
  
 0.497
Your Current Organism:
Sus scrofa
NCBI taxonomy Id: 9823
Other names: S. scrofa, pig, pigs, swine, wild boar
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.